CDS

Accession Number TCMCG002C15082
gbkey CDS
Protein Id XP_020095286.1
Location complement(join(2625269..2625525,2625826..2625958,2626079..2626624,2626777..2627010,2627604..2627919,2628006..2629774,2630414..2630479,2630555..2630680,2630776..2631135,2631245..2631426,2631571..2631707,2632154..2632620,2633132..2633587,2633952..2634213,2634305..2634445,2634529..2634709,2635809..2636145,2636223..2636463,2636544..2636736,2637486..2637829,2637913..2637987,2638367..2638574,2638665..2638868,2639492..2639674,2640192..2640298,2640510..2640583,2640666..2640744,2640972..2641016,2641825..2641982,2642739..2642861,2642960..2643025))
Gene LOC109714941
GeneID 109714941
Organism Ananas comosus

Protein

Length 2689aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020239697.1
Definition small subunit processome component 20 homolog [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category V
Description Down-regulated in metastasis
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACCGCACAGTCGCACGCGGTGAAGTGCCTCAACACATCCACCGGGGGGAAGCGCTTCGTCTTCAAGAGCTTCTACCAGCGCGTGGAGGAGATCGACATCGATGTGTTCCGCAGCTTGGAGCCCGTAAAATTGGAGCCCTCGAGCGGGTCCTCCTTCTTTCGCGAGAGCCTCTTGCAGTGGCGAGAACTAAATACTGCAGAAGATTTTATATCATTTTATGAGAAGATGATGCCATTGGTACAGACACTGCCTCAGATTATACTGCATCGAGAACTGATTTTCTCGGAGCTGCTTAAGAGATTGAACATGAAAGCAAGATTGTCTCTTGAGCCAATACTAATGTTAATTGCTTCTTTCTCCAGAGATGTCCTTGAAGAGTTCCTGCCTTTGTTGCAAAGGCTCACCAACTCCTTAGTAGATCTTCTTACTAATGGTGGAGATCGTGATCCTGAAGTTTTGGAGCAGGTCTTCACATCTTGGTCATACATCATGATGTATCTACAAAAGTATCTTGTTAAAGATGTTCAGCACATTCTGATAATTACAGCTCAATTAAGATTTTACCCCAAGGATTATGTTCGAGAATTCATGGCCGAAGCTGTTTCATTTGTGCTGAGGAATTCACCCATTAATCAACTCTATAAAGGCTTAACGAAGGTTGTAAAGGAGGTTGCTAAAACTCCATCTCCGGCAAGAAAAGGTGGAGTCACGGCTTTGTTATGGCATGTCATGAAAGGGACTTCCTCAAGGCTTCACTCAAGGGCTGAAAAAGTGTTTAGGTTTCTAATTGATAAGTTCATTCTTGAACTTATTCATAAATTTCCTCAAGGCTCAGAAGCTGTTTATGAGGTTAGAACTGGATTAGTCTCCAGACTATGTCGTGAAGTGGATCAAAAAGAATTGAAATTGATGTATAATTGCTTATTAAAAGAAACTTTCAACTGCATCGATGATGGCTGCTCGGAACATCTTAATGAAATGTTGGGCCTTCTTAAGTTTGCTGTTCAGAAAAGCAGTAGGAAGCAAGTTCTTGATACTGAAACCATGTTTCGGCTTGTCCAATTGCTCATAGAAAAGTATATGATGGCTGCTGATGCTAGAGAGTTGGAGAATAAGTTTTCTGAGGTTGTTAGCAGTATTTTGGGGCTAATGCTTTGCCTTCTGGATGTTCCTCTCATTTCTACTGATTTAATGCGAATATCACTATTATATACTCCGGCATTTCAGTTGAGAAGCTCAAGCCTCGTCACTTTTGTCAGGGAACTTCTTACAAAAGATCCTCAAATATTACATGTTTTCAGTAGTCACATTATGAGTGCCATGGATAATTTTGTTGAAGCTTCGCCAGAAGAAGTTCTTTTTGTCCTTTTGACATTTTTTGAAAGACAAGGGAGTGATAGCATAATCAGGGAGCCTGAAGATAAGGTAAAGAAACTATGCCGCTTCTTTAAGATGAAACTTTGTCAGTGGAACGAGTTATTAAATGGTGTTGAAGCAAGTGGCAATCGAGCAGATATTCAAGTTAGTGTATCAGAAGCGGGAATACTCTGGGGAGTTCTCAGCTGCTATCCTCATTTCCAAAATCTAAAAGATGATTTATGGTCAATAAAGAATCTTATTGCCCAACTTGATTGTCTTCTGCAAGCAGAAGGTGGTACAGATAGCATTGGGGGCCTTTCAAGATCCACTTGGCAAAGTTTAATTGGTGTGGCGTTGACATCATTTCGTAAATTGTTAATGGTCAGCAATCTTGGAAGCCTGGAAAGAAGTCTCTTCCTGTCTCTGGCTAAAAAATACAGGACATCTCCACATGTGCTTTCTGCTGTCGCCGACTTTTGGGACTCTGTGCTAGGTGAAAAATTCTCTTCGCAGAGCGTACTACAGGAATTCGATGTGCAGAATGCTTTGGACTCTTTTTGCACATTTGCTGACAACTTGAGCATGCCAAATAAGGAAGTTCGTGTTTCGACGTTGAGAATTTTGTCCCATTATGCACCTTTGGAGCAACAGTTGCCTACAGGTGATGAACCTCCTAATAAAAAGCTGAAAACAGAAGATTCAGGATCAGGGAAAGAAGATGCTAAACACACTAATGTTGTTGAGCTCCTCCTTCAGGTTGAGTCACTCCCTCTTTCAACCTCTACAGATCGGAGTATCACAATACTAATTTCCAGAATACAGACGAGCCTTTATTTTGGGAAGATCAATAACGACTACATACCTCTTCTTTTAAATGGGATTATAGGCATATTATACAATAGACTTAGCAGCCTTTGGAAGCCTGCATTGGAATGCTTGGCTCTTCTAATCAGCAAATACAAGGATCTTGTTTGGAATAGATTTATCCAGTATCTTGGAACTCTTCAGTCAAAATCTTTATCCTCTGAAGATCACCTGATGAAGCTGAATAGAGAAGCTCCTCAACCAATTTCTCTCTTTGAGTGCTTCGACTTATACCTTGTTCCTGATTCTGATTGCACTCCATGCATGACGGTTACTGTCTCATTGCTGCAATCACTTCAAAAGATACCTGAAATTGCAGAATCTCGCTCACGACAGCTTATACCATTGTTCCTAAATTTCATGGGTTATACTGATGAAGATGCTATAAGTGTCGAATCTTATATATCGGAGAAATGCAAGGGAAAGGATTGGAGGATGGTTCTTAAAGAATGGCTGAACTTGTTGAGACTGATGCGCAATGCTCGATCTTTGTATTGCAACAAAGTCCTTAAGGAAGTTTTAATGATAAGGCTCCTTGATGAGACAGATCCTGATGTACAACTGAAAGTTCTTGATTGCCTATTGAACTGGAAGGATGACTTTTTGGTCCCATATGAACAGCATCTTAAAAATCTTGTTATTGCAAAGAACCTTCGAGAAGAGCTTACTACATGGGCAGTTTCAAAAGACCTTCAGTCCATTCAGGAAGATTACAGAGGCCATTTAGTTTCTTTAATTATTCGAGTACTTACTCCTAAAGTTAGGAAACTGAAGACACTTGGCTCACGGAAGCATGCAGGTGTTAGTCATCGAAAGGCGATTCTTCGTTTTTTCTCACAGTTTGATGTAAACGAGCTGCAGCTCTTCTTTTATTTGCTGCTGAAGCCCTTAGTTCCCAGGTCCCTCCTTATTGAAGTTTCAGATTCCCTGACTACCAGCATGTTTGACAATTTTATAGACAAGTTTTTATCATATATTGCAAAAGTTGCAACCTTAACTACAACAGATGATATTTCGTGGAAAAGAATAGATGGGTTCCTCCATGTAGTTGAGGATATCTTGGGAACTTTTGATCTGATGCATGTTGGGCCATTTCTTAATCCTTTTTTGATGATTGTTGTTCGAATTCTGGAAATGTGCAAGTGGAACCTGGCAAGCAAAAACAGTGGTAACACTTATCCCAGGGGAGATAATTCTGGAAATTTAGAGGTTCACAAGGACAATACTTTGGCACCAGGCTCTCTAATGATTAATATATCCAATGACCAGGTCAAGGATCTGCGGTCCCTGTGCCTGAAAGTAATTTCTTCCACTCTTAATAAGCACGACACTCATGACTTCAGCTCAGAGTTTTGGCACATCTTTTTCACTTCAGTGAAGCCTTTACTCGACAACTTCAAGCAGGAGGGTGCAAGTAGTGAAAAACCAAGCTCACTTTTTTCATGCTTTATCGCAATGAGCCAGAGCCCAACACTAGTCCCTCTGTTAGGGAGGGAGACTAATCTTATCTCAGCAATATTCTCTATCTTAACTGTGAGGACAGCATCCGATGCTATCCTATCTTCTGTTCTTGATTTCATTGAAAATTTGTTGAAGCTAGATAAAGATTTGGATAGCGAGGGGAGTGATACTGTCAAGAGGATTTTAGAGCCTCATGTTGAGGTTCTTGTTAGTAGTTTCCGTGACCTCTACCAGACTCGCAGAGAATTTCATAGGAAATCCACCATTTGGCCGGGGCAGAGGGAATTGAGGATATTCAAACTATTAGTGAAGTATATCAGGGACCCTGTGTCAGCAGATTATTTTCTTGATATTTTACTTCCATTTTTAAGGAAGAAAGATTTAAATTCTGATGAATGTTTGGAGGGTCTACAAGTTGTCAAAGGAATTGTTGCAGTATTAGGTCATGAAGCATTTGGAAAAGTCCTACAAGCAATTCACCCATTACTTGTTACCGCTGAACTAGGTTTGCGGTTGTGCATTTGTGATATTCTCGACGGTCTTGCTTTACGTGATCCTTCGTATGCCTTCCTGGCTACACTTTTACGAGATCTAAATGCAGTTTCTTCCTCAGAACTTGGTGAACTAGATTATGACGCAAGAATTAAAGCGTATGATACAGTAAGGCATGAGTTATTTCCTGAATTGAGAGAAGAGCATGCTGTGGCCATACTATCTCATTGTGTATGGGATATGTCTTCGGAAGAACTGATCTTTCGACAAAGTGCATCGAGGGCATTACATTCTTTTCTACAGTTTGCTACATCAATTTTAGGGTCAGCGGAAAGTATTATTAGCAGCATTTGGACAAAAGCTTCCATTCAGAGAATTCTAGAGAAGACCTATTTGCATAGCATGGGAGATGCTATGAGCAAGGACATTTCAATTCAAAAAGAATGGATTACTTTACTGCGAGAAATGGTGTTTAATTTTGAACAAGTTCCATCTCTAAGTTCATTCAAACCTCTCTGTAGCACAGATCCTGAAGTAGACTTCTTCAACAACATAACTCATTTACAGATTCATAGAAGATCAAGAGCGTTATCACGATTCAGGAATGTAATCACTGCTGGGAACTTTTCAGAGGACTTGACTATGAAAATCTTTGTGCCACTGTTTTTCAACATGCTGTTTGATGTGAAAGATGGAAAGGGTGAACATCTAAGAAATGCATGTGTAGAGACCCTTGCTTCTGTAGCAGGCCAGCTTCAGTGGGAGTCCTATCGTACTATTCTGATGAGATGCTTCCGAGAGCTGTCTGTTAAGCAAGACAAACAGAAAATCCTTTTGCGACTGATATGTGCCGTCTTACATGTCTTCCATTTCTTTGACTCCCACTCTAATAATGGTGTAAAAGATAGTGGAGTTGAGGGTGATTTTCATCTTTGTAGTTCATCTTCGCAAAATGTCTCCCCTGAGAAACAGCAATATTTGCAAAAGGTGCTTCTTCCTCTGGTTCAAAAATTGCTTGTCTCAGACCCTGAGAAAGTTAATGTAAATATTAGTCTTGTGGCACTCAAAGTACTTAAATTATTACCGACAGATATTTTGGATTCACAACTTTCAAGCATTATACACCGCATTTGTAATTTCTTGAAAAACCGTCTAGAAAGCATCCGTGACGAAGCTAGGTCTGCTTTGGCTGCATGTCTGAAGGAACTGGGTGTGGAGTATTTGCAGCTTGTTGTAAAGATTTTGCAAGCTATATTGAAGAGGGGGTATGAGTTACATGTGTTGGGCTACACCCTCAATTTCATATTATCAAAGACCCTAACAGAAGGCTCTACTGGAAAGATTGACTACTGTTTGGCGGAGCTTATCTCTGTAGTTGAAAGCGACATTCTTGGAGATGTCGCGGAGGAGAAAGAAGTCGACAAAATTGCTTCCAAAATGAAAGAGACGAGGAAGAAGAAGTCGTTTGAGACTCTGAAGTTGATCGCTCAAAGTATTACATTTAGAACGCATGCTCTGAAGTTGCTTTGGCCCATCGCGGCACACCTTCAGAAACACCTGACACCAAAGATGAAGAAAAGGCTGGAAATGATGCTTAATTATATAGCTTTGGGAATTGAATGTAACCCATCCGCAGGAAATAAGGAGTTGTTTGTATTTGCATATGGACTAATTGAAGATACTGTTACTGAACAGAGTTCCAATGGCAAAGAGGCATCCAGCGATGAAATTAGCAACAGAACAACTTTTTTGGTGCTTGGTGATAATGGTTTGCGAAATTCACATCTGATCACCGAGTTTTCCCTTGGATTATTGCGCAACAGGTTAAAGAAAATGAAGCTGGACAAGAAAGACGAGCAGTTGCTATCAATGTTAGACCCTTTTGTTAAACTTTTCGGAGAATGCTTGAATTCCAAGTATGAAGATGTCCTTTCATCTGCTATTAGATGTCTTGCTACATTGATTAGGTTGCCATTACCGTCCCTCGAAGCCCAGGCCGAGAAGATGAAGAATATACTTTTTGACATAGCTCGGAAATATGGAAATTCTAAAAATACTTTGTTGCAATCCTGTCTCAAGCTGCTCACGAATTTACTACAAAGCTGCAGGATCTCACTTTCTAACAATCAGCTCCACATGCTTATTCAGTTCCCTGTTTTTGTTGATCTGGAGACTAACCCTTCACCTATTGCCCTCTCTCTCTTGAAGTCGATTGTTAGTAGAAAATTAGTTGTCCCCGAAATCTATGATATTGTGGTGAAAGTTTCAGAATTGATGGTAACTAGTCAATCAGAAGCCATACGCAAGAAGTCCAGCCAAATTCTACTGCAGTTTCTGTTGGATTATGAGCTTTCCAACAAGCGCTTACAACAGCACATGGATTTTCTACTCACAAATTTGAGTTATGAACATTCATCGGGGAGAGAAGCTGTGCTTGAGATGATCCATGCTCTCCTGGTTAAATCTCCTGAAAGTCTCATTGAGAATCAGGCTCAGACATTCTTTGTTCGTCTGGTTCTTTCTCTGGCCAATGATCATGAACATAAAGTCCAATCTATGGTTGGCACGGTGATAAAAGTGTTGATAGGTCGCCTTTGCCATCTAAGAGCTAATCCGCGTGCGTTGGATCCTATTCTCGAGTATAGTCTTGCTTGGTACACTGGTGAGAAACAACAGCTATCTGGTGAGAAACAACAGCTATGGAGTGCTGCAGCTCAGGTCCTTGGTTTGCTGGTTGAAGTTCTCAAAAAAGGATTCAACAAGCATATAAATAGAGTATTATCAGTTGCAAAACACATTCTGGAATCTTCTATTCTTGCTTCTAGCGATGTAGAGCTTGACTTTTCAAATGAAGCTGGCGTTCCATTTTACAAGGAGGCTTATTATTCACTTGTTATGCTCGAGAAGATACTACAACATTTTCCCGAAATGTATTTTGACAGGAAATTCGAGGACTTATGGGCGTTGATTTGTAAGTCCTTGCTTCATCCGCACATGTGGTTGCGGCGCATCTCGAATCGGCTAGTAGCTTTATACTTTGCTGCGGCGTCAGAGGCTGGAAGAACAAATAATGAAACGATAAAGAGTGGAGCACTATTTCTGGTCAATCCAAGTAGACTTTTCTTATTAGCGGTGTCTTTTGTAAGTCAACTCAGGACAGAACTTAGCGATGAGGCAGCAAACAATCTCATTGCACAAAATATCGTATTTTCTATTTGTGGGTTGCACTCCTTTGCAAAGCAGAGGAAACTTTCAGCATTGCATCAGTTTTGGTCTACTCTTAGCTCTGACGAGCAAGGGTTGTACCTCAAGGGTTTTGAATTGCTAGCTTCGAGAAAGGCTCAGGATCAGTTTCTGCTTTGTACCACCACTACAAGTGTTTCTTTGGTCGGAGAGGATCAAATTATTCACGAGGCAGGTGAAGATCTTAAGTCCTTGCTAGTTGCGCCTTTGCTCAAGAAGATGGGAAAGATTGCAATGCAAATGGAAGATGCTCAGATGAAAATCGTCTTTAATTGCTTCAAAATGATTTCATTACAACTTGGTTCCGAAGACTCCCTTGCCTATGCCCCTCAGATGCTTTTTCCTTTATATAAAGTTTGCGAAGGATTTGCTGGAAAGATCGTCGGCGATGAAATCAAGCAATTAGCGGAAGAGGTGCGCGACAGCGTGCGCGACGTGTTAGGGGTGGATAATTTCGTGCAAGTCTACAACATGATCAGGAAGAATCTCAAGCAGAAGAGGGAGAAGCGCAAGCAGTCGCAGAAGCTCGTCGCGGTCGTCAACCCGATGCGCCATGCCAAGCGGAAGCTGCAGATCGCCGCGAAGCACCGCGCCCACAAGAAGCGGAAGATAGCGGCGATGAAGGCGGGGACATGGAAGAGATAG
Protein:  
MATAQSHAVKCLNTSTGGKRFVFKSFYQRVEEIDIDVFRSLEPVKLEPSSGSSFFRESLLQWRELNTAEDFISFYEKMMPLVQTLPQIILHRELIFSELLKRLNMKARLSLEPILMLIASFSRDVLEEFLPLLQRLTNSLVDLLTNGGDRDPEVLEQVFTSWSYIMMYLQKYLVKDVQHILIITAQLRFYPKDYVREFMAEAVSFVLRNSPINQLYKGLTKVVKEVAKTPSPARKGGVTALLWHVMKGTSSRLHSRAEKVFRFLIDKFILELIHKFPQGSEAVYEVRTGLVSRLCREVDQKELKLMYNCLLKETFNCIDDGCSEHLNEMLGLLKFAVQKSSRKQVLDTETMFRLVQLLIEKYMMAADARELENKFSEVVSSILGLMLCLLDVPLISTDLMRISLLYTPAFQLRSSSLVTFVRELLTKDPQILHVFSSHIMSAMDNFVEASPEEVLFVLLTFFERQGSDSIIREPEDKVKKLCRFFKMKLCQWNELLNGVEASGNRADIQVSVSEAGILWGVLSCYPHFQNLKDDLWSIKNLIAQLDCLLQAEGGTDSIGGLSRSTWQSLIGVALTSFRKLLMVSNLGSLERSLFLSLAKKYRTSPHVLSAVADFWDSVLGEKFSSQSVLQEFDVQNALDSFCTFADNLSMPNKEVRVSTLRILSHYAPLEQQLPTGDEPPNKKLKTEDSGSGKEDAKHTNVVELLLQVESLPLSTSTDRSITILISRIQTSLYFGKINNDYIPLLLNGIIGILYNRLSSLWKPALECLALLISKYKDLVWNRFIQYLGTLQSKSLSSEDHLMKLNREAPQPISLFECFDLYLVPDSDCTPCMTVTVSLLQSLQKIPEIAESRSRQLIPLFLNFMGYTDEDAISVESYISEKCKGKDWRMVLKEWLNLLRLMRNARSLYCNKVLKEVLMIRLLDETDPDVQLKVLDCLLNWKDDFLVPYEQHLKNLVIAKNLREELTTWAVSKDLQSIQEDYRGHLVSLIIRVLTPKVRKLKTLGSRKHAGVSHRKAILRFFSQFDVNELQLFFYLLLKPLVPRSLLIEVSDSLTTSMFDNFIDKFLSYIAKVATLTTTDDISWKRIDGFLHVVEDILGTFDLMHVGPFLNPFLMIVVRILEMCKWNLASKNSGNTYPRGDNSGNLEVHKDNTLAPGSLMINISNDQVKDLRSLCLKVISSTLNKHDTHDFSSEFWHIFFTSVKPLLDNFKQEGASSEKPSSLFSCFIAMSQSPTLVPLLGRETNLISAIFSILTVRTASDAILSSVLDFIENLLKLDKDLDSEGSDTVKRILEPHVEVLVSSFRDLYQTRREFHRKSTIWPGQRELRIFKLLVKYIRDPVSADYFLDILLPFLRKKDLNSDECLEGLQVVKGIVAVLGHEAFGKVLQAIHPLLVTAELGLRLCICDILDGLALRDPSYAFLATLLRDLNAVSSSELGELDYDARIKAYDTVRHELFPELREEHAVAILSHCVWDMSSEELIFRQSASRALHSFLQFATSILGSAESIISSIWTKASIQRILEKTYLHSMGDAMSKDISIQKEWITLLREMVFNFEQVPSLSSFKPLCSTDPEVDFFNNITHLQIHRRSRALSRFRNVITAGNFSEDLTMKIFVPLFFNMLFDVKDGKGEHLRNACVETLASVAGQLQWESYRTILMRCFRELSVKQDKQKILLRLICAVLHVFHFFDSHSNNGVKDSGVEGDFHLCSSSSQNVSPEKQQYLQKVLLPLVQKLLVSDPEKVNVNISLVALKVLKLLPTDILDSQLSSIIHRICNFLKNRLESIRDEARSALAACLKELGVEYLQLVVKILQAILKRGYELHVLGYTLNFILSKTLTEGSTGKIDYCLAELISVVESDILGDVAEEKEVDKIASKMKETRKKKSFETLKLIAQSITFRTHALKLLWPIAAHLQKHLTPKMKKRLEMMLNYIALGIECNPSAGNKELFVFAYGLIEDTVTEQSSNGKEASSDEISNRTTFLVLGDNGLRNSHLITEFSLGLLRNRLKKMKLDKKDEQLLSMLDPFVKLFGECLNSKYEDVLSSAIRCLATLIRLPLPSLEAQAEKMKNILFDIARKYGNSKNTLLQSCLKLLTNLLQSCRISLSNNQLHMLIQFPVFVDLETNPSPIALSLLKSIVSRKLVVPEIYDIVVKVSELMVTSQSEAIRKKSSQILLQFLLDYELSNKRLQQHMDFLLTNLSYEHSSGREAVLEMIHALLVKSPESLIENQAQTFFVRLVLSLANDHEHKVQSMVGTVIKVLIGRLCHLRANPRALDPILEYSLAWYTGEKQQLSGEKQQLWSAAAQVLGLLVEVLKKGFNKHINRVLSVAKHILESSILASSDVELDFSNEAGVPFYKEAYYSLVMLEKILQHFPEMYFDRKFEDLWALICKSLLHPHMWLRRISNRLVALYFAAASEAGRTNNETIKSGALFLVNPSRLFLLAVSFVSQLRTELSDEAANNLIAQNIVFSICGLHSFAKQRKLSALHQFWSTLSSDEQGLYLKGFELLASRKAQDQFLLCTTTTSVSLVGEDQIIHEAGEDLKSLLVAPLLKKMGKIAMQMEDAQMKIVFNCFKMISLQLGSEDSLAYAPQMLFPLYKVCEGFAGKIVGDEIKQLAEEVRDSVRDVLGVDNFVQVYNMIRKNLKQKREKRKQSQKLVAVVNPMRHAKRKLQIAAKHRAHKKRKIAAMKAGTWKR